Holdemania
| Holdemania | |
|---|---|
| Scientific classification | |
| Domain: | Bacteria |
| Kingdom: | Bacillati |
| Phylum: | Bacillota |
| Class: | Erysipelotrichia |
| Order: | Erysipelotrichales |
| Family: | Erysipelotrichaceae |
| Genus: | Holdemania Willems et al. 1997[1][2] |
| Type species | |
| Holdemania filiformis Willems et al. 1997 | |
| Species | |
Holdemania is a Gram-positive, strictly anaerobic and non-spore-forming genus from the family Erysipelotrichaceae, with two known species: Holdemania filiformis[1][3][4] and Holdemania massiliensis.[5]
This genus was named after Lilian V. Holdeman an American microbiologist from the Anaerobe Lab at Virginia Tech.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[6]
| 16S rRNA based LTP_10_2024[7][8][9] | 120 marker proteins based GTDB 09-RS220[10][11][12] | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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References
- 1 2 3 J.P. Euzéby. "Holdemania". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ↑ Willems, A., Moore, W.E., Weiss, N., and Collins, M.D. "Phenotypic and phylogenetic characterization of some Eubacterium-like isolates containing a novel type B wall murein from human feces: description of Holdemania filiformis gen. nov., sp. nov." Int. J. Syst. Bacteriol. (1997) 47:1201-1204.
- ↑ "Holdemania". Www.uniprot.org.
- ↑ Willems, Anne (1 January 2015). "Holdemania". Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–5. doi:10.1002/9781118960608.gbm00764. ISBN 9781118960608.
- ↑ "Holdemania massiliensis". Www.uniprot.org.
- ↑ Sayers; et al. "Holdemania". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ↑ "The LTP". Retrieved 10 December 2024.
- ↑ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ↑ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
- ↑ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.
Further reading
- Mishra, Ajay Kumar; Lagier, Jean-Christophe; Pfleiderer, Anne; Nguyen, Thi Thien; Caputo, Aurelia; Raoult, Didier; Fournier, Pierre-Edouard (15 December 2013). "Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov". Standards in Genomic Sciences. 9 (2): 395–409. Bibcode:2013SGenS...9..395M. doi:10.4056/sigs.4628316. PMC 4062643. PMID 24976895.
- Paul, De Vos (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.