I am looking to set remmina (more specifically a remmina file) to boot when the Ubuntu 14.04 system boots. I was looking for help as to what command to enter for a certain .remmina file to boot. Thank you!
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Assuming you have connected to the remote system before, there will be a config file for this connection in ~/.remmina/. The config file will be of the form [numeric string].remmina. If you have several files, I know of no easy way to find the one you want from looking at the file names. However, you can open the files with a text editor until you find the one you want.
Once you know which config file to use [desired-config-file].remmina, the terminal command line to start remmina in that config file is remmina -c [desired-config-file].remmina.
You can simply add this command line to Startup Applications in Ubuntu.
As a commenter said, you don't want this command line to execute until your desktop has started. You may have to add a wait command to achieve that; unfortunately I don't remember how to do that.
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